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Harmless Git weirdness: git rm -r does not delete physical files, but doesn't list them as untracked either

Somehow, in git 1.6, after running git rm -r example to get rid of a directory (called example), it leaves the files there but from then on ignores them. git status lists nothing, ls shows the directory example is still there, and then rm -rf example removes the directory and git status still shows nothing.

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